Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.19■□□□□ 0.02
EXTL3O43909 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
EXTL3O43909 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
EXTL3O43909 AC089987.1-201ENST00000551654 2209 ntBASIC15.19■□□□□ 0.02
EXTL3O43909 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 PYY2-201ENST00000315776 282 ntBASIC15.19■□□□□ 0.02
EXTL3O43909 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.19■□□□□ 0.02
EXTL3O43909 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.19■□□□□ 0.02
EXTL3O43909 AC005722.1-201ENST00000431878 964 ntBASIC15.19■□□□□ 0.02
EXTL3O43909 AL627422.1-201ENST00000434104 580 ntBASIC15.19■□□□□ 0.02
EXTL3O43909 ERP29P1-201ENST00000442902 706 ntBASIC15.19■□□□□ 0.02
EXTL3O43909 CHCHD2P9-201ENST00000461726 456 ntBASIC15.19■□□□□ 0.02
EXTL3O43909 ORAOV1P1-201ENST00000503108 395 ntBASIC15.19■□□□□ 0.02
EXTL3O43909 MRPL22P1-201ENST00000505398 616 ntBASIC15.19■□□□□ 0.02
EXTL3O43909 IQSEC3P1-201ENST00000538799 536 ntBASIC15.19■□□□□ 0.02
EXTL3O43909 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.19■□□□□ 0.02
EXTL3O43909 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.19■□□□□ 0.02
EXTL3O43909 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.19■□□□□ 0.02
EXTL3O43909 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.19■□□□□ 0.02
EXTL3O43909 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.19■□□□□ 0.02
EXTL3O43909 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
EXTL3O43909 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
EXTL3O43909 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
EXTL3O43909 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.19■□□□□ 0.02
EXTL3O43909 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.19■□□□□ 0.02
EXTL3O43909 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EXTL3O43909 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.19■□□□□ 0.02
EXTL3O43909 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 PDXDC2P-206ENST00000534700 1315 ntBASIC15.18■□□□□ 0.02
EXTL3O43909 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.18■□□□□ 0.02
EXTL3O43909 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
EXTL3O43909 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
EXTL3O43909 AC073869.1-201ENST00000415574 2762 ntBASIC15.18■□□□□ 0.02
EXTL3O43909 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 AC026316.1-201ENST00000398900 414 ntBASIC15.18■□□□□ 0.02
EXTL3O43909 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.18■□□□□ 0.02
EXTL3O43909 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.18■□□□□ 0.02
EXTL3O43909 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.18■□□□□ 0.02
EXTL3O43909 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.18■□□□□ 0.02
EXTL3O43909 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.18■□□□□ 0.02
EXTL3O43909 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.18■□□□□ 0.02
EXTL3O43909 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 RN7SL555P-201ENST00000584742 339 ntBASIC15.18■□□□□ 0.02
EXTL3O43909 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.18■□□□□ 0.02
EXTL3O43909 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.18■□□□□ 0.02
EXTL3O43909 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.18■□□□□ 0.02
EXTL3O43909 AL031673.1-201ENST00000611460 466 ntBASIC15.18■□□□□ 0.02
EXTL3O43909 AP003419.4-201ENST00000616071 517 ntBASIC15.18■□□□□ 0.02
EXTL3O43909 AC103691.2-201ENST00000618824 433 ntBASIC15.18■□□□□ 0.02
EXTL3O43909 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
EXTL3O43909 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 NRADDP-202ENST00000641269 1585 ntBASIC15.18■□□□□ 0.02
EXTL3O43909 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.18■□□□□ 0.02
EXTL3O43909 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.18■□□□□ 0.02
EXTL3O43909 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
EXTL3O43909 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms