Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.12□□□□□ -0.15
SMAD6O43541 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.12□□□□□ -0.15
SMAD6O43541 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.12□□□□□ -0.15
SMAD6O43541 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMAD6O43541 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SMAD6O43541 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.11□□□□□ -0.15
SMAD6O43541 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.11□□□□□ -0.15
SMAD6O43541 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.11□□□□□ -0.15
SMAD6O43541 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SMAD6O43541 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.11□□□□□ -0.15
SMAD6O43541 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.11□□□□□ -0.15
SMAD6O43541 AC092638.2-201ENST00000441105 947 ntBASIC14.11□□□□□ -0.15
SMAD6O43541 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.11□□□□□ -0.15
SMAD6O43541 COQ10BP2-201ENST00000513804 724 ntBASIC14.11□□□□□ -0.15
SMAD6O43541 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.11□□□□□ -0.15
SMAD6O43541 AP003398.1-201ENST00000531124 318 ntBASIC14.11□□□□□ -0.15
SMAD6O43541 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.11□□□□□ -0.15
SMAD6O43541 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SMAD6O43541 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.11□□□□□ -0.15
SMAD6O43541 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.11□□□□□ -0.15
SMAD6O43541 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 NRADDP-202ENST00000641269 1585 ntBASIC14.11□□□□□ -0.15
SMAD6O43541 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.11□□□□□ -0.15
SMAD6O43541 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SMAD6O43541 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMAD6O43541 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SMAD6O43541 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SMAD6O43541 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SMAD6O43541 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.1□□□□□ -0.15
SMAD6O43541 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SMAD6O43541 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.1□□□□□ -0.15
SMAD6O43541 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.1□□□□□ -0.15
SMAD6O43541 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.1□□□□□ -0.15
SMAD6O43541 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SMAD6O43541 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SMAD6O43541 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SMAD6O43541 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.1□□□□□ -0.15
SMAD6O43541 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.1□□□□□ -0.15
SMAD6O43541 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.1□□□□□ -0.15
SMAD6O43541 MIR4326-201ENST00000582203 59 ntBASIC14.1□□□□□ -0.15
SMAD6O43541 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.1□□□□□ -0.15
SMAD6O43541 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.1□□□□□ -0.15
SMAD6O43541 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.1□□□□□ -0.15
SMAD6O43541 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMAD6O43541 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.1□□□□□ -0.15
SMAD6O43541 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SMAD6O43541 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.09□□□□□ -0.15
SMAD6O43541 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SMAD6O43541 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SMAD6O43541 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMAD6O43541 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SMAD6O43541 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SMAD6O43541 AC117503.4-201ENST00000623229 1418 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms