Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.55□□□□□ -0.56
RCL1Q9Y2P8 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 AC012531.1-201ENST00000562848 2680 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 AC022144.1-201ENST00000602255 1580 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 AP001972.5-201ENST00000624624 2338 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 SPDYE19P-201ENST00000338590 713 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 ACKR1-201ENST00000368121 1240 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 AC067863.1-201ENST00000494933 530 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 AC025678.2-201ENST00000562061 970 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 ENPP7P14-201ENST00000621765 1040 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 AC020917.4-201ENST00000623994 1999 ntBASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RCL1Q9Y2P8 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RCL1Q9Y2P8 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms