Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 LINC00265-2P-201ENST00000413372 782 ntBASIC11.86□□□□□ -0.51
RNF7Q9UBF6 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 UPF3AP2-201ENST00000457924 1132 ntBASIC11.86□□□□□ -0.51
RNF7Q9UBF6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 CHMP4BP1-201ENST00000556017 588 ntBASIC11.86□□□□□ -0.51
RNF7Q9UBF6 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 MIR3677-201ENST00000578964 60 ntBASIC11.86□□□□□ -0.51
RNF7Q9UBF6 SIGLEC18P-201ENST00000602271 909 ntBASIC11.86□□□□□ -0.51
RNF7Q9UBF6 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF7Q9UBF6 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AC234782.1-201ENST00000451950 919 ntBASIC11.85□□□□□ -0.51
RNF7Q9UBF6 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 RN7SL769P-201ENST00000469386 295 ntBASIC11.85□□□□□ -0.51
RNF7Q9UBF6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 RPL18AP8-201ENST00000486071 528 ntBASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 RN7SL665P-201ENST00000578793 300 ntBASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AL139424.3-202ENST00000641619 917 ntBASIC11.85□□□□□ -0.51
RNF7Q9UBF6 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AC023794.5-201ENST00000564380 2157 ntBASIC11.85□□□□□ -0.51
RNF7Q9UBF6 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RNF7Q9UBF6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 AC008620.2-201ENST00000510294 1569 ntBASIC11.84□□□□□ -0.51
RNF7Q9UBF6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 KRT8P43-201ENST00000406052 1458 ntBASIC11.84□□□□□ -0.51
RNF7Q9UBF6 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC11.84□□□□□ -0.51
RNF7Q9UBF6 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms