Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RN7SL357P-201ENST00000581065 298 ntBASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 AC140113.1-201ENST00000603467 169 ntBASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 AC089987.1-201ENST00000551654 2209 ntBASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 AC072061.1-201ENST00000569710 2234 ntBASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20BQ9P0W2 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 AL928654.5-201ENST00000624831 2501 ntBASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 RPL3P2-204ENST00000413027 1203 ntBASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 AC018463.1-201ENST00000456674 917 ntBASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 AP005264.5-201ENST00000590066 467 ntBASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HMG20BQ9P0W2 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AC090502.4-201ENST00000551714 1386 ntBASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 RN7SL767P-201ENST00000493013 295 ntBASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 IGHV1-12-201ENST00000518307 205 ntBASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 SNORD3B-1-201ENST00000577988 758 ntBASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AL031673.1-201ENST00000611460 466 ntBASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 AC105137.3-201ENST00000617588 984 ntBASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 LINC00244-201ENST00000625073 613 ntBASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.02■□□□□ 0.32
HMG20BQ9P0W2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms