Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MEG3_2.1-201ENST00000611456 105 ntBASIC14.91□□□□□ -0.02
CD248Q9HCU0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 SALL4P5-201ENST00000419001 1760 ntBASIC14.9□□□□□ -0.02
CD248Q9HCU0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 CYP4F23P-201ENST00000593402 1579 ntBASIC14.9□□□□□ -0.02
CD248Q9HCU0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 RTN3P1-201ENST00000536295 711 ntBASIC14.9□□□□□ -0.02
CD248Q9HCU0 MIR5572-201ENST00000583188 137 ntBASIC14.9□□□□□ -0.02
CD248Q9HCU0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 AC009884.2-201ENST00000603110 324 ntBASIC14.9□□□□□ -0.02
CD248Q9HCU0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 AC027601.3-201ENST00000622907 509 ntBASIC14.9□□□□□ -0.02
CD248Q9HCU0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CD248Q9HCU0 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD248Q9HCU0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 AC006122.1-201ENST00000493323 440 ntBASIC14.89□□□□□ -0.03
CD248Q9HCU0 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms