Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KIAA1549Q9HCM3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KIAA1549Q9HCM3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
KIAA1549Q9HCM3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.35□□□□□ -0.43
KIAA1549Q9HCM3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
KIAA1549Q9HCM3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KIAA1549Q9HCM3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KIAA1549Q9HCM3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 RHOC-205ENST00000369636 786 ntTSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 AL139008.1-201ENST00000437894 228 ntBASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 AC005077.3-201ENST00000449614 213 ntBASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 ACTG1P19-201ENST00000418987 1116 ntBASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 AL136982.5-201ENST00000605222 294 ntBASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.34□□□□□ -0.43
KIAA1549Q9HCM3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
KIAA1549Q9HCM3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
KIAA1549Q9HCM3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
KIAA1549Q9HCM3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AC020917.4-201ENST00000623994 1999 ntBASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 AQP7P5-201ENST00000428759 1049 ntBASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 KRT18P46-201ENST00000435568 1279 ntBASIC12.33□□□□□ -0.44
KIAA1549Q9HCM3 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms