Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 TPM3P8-201ENST00000330554 643 ntBASIC11.46□□□□□ -0.57
RAB40CQ96S21 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 MIR661-201ENST00000384842 89 ntBASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC103592.1-201ENST00000394513 664 ntBASIC11.46□□□□□ -0.57
RAB40CQ96S21 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC123567.1-201ENST00000548294 1261 ntBASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC106820.3-201ENST00000561653 397 ntBASIC11.46□□□□□ -0.57
RAB40CQ96S21 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AC145423.3-201ENST00000615987 467 ntBASIC11.46□□□□□ -0.57
RAB40CQ96S21 RPSAP52-203ENST00000622976 1023 ntBASIC11.46□□□□□ -0.57
RAB40CQ96S21 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB40CQ96S21 VENTXP1-201ENST00000569334 2716 ntBASIC11.46□□□□□ -0.58
RAB40CQ96S21 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB40CQ96S21 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
RAB40CQ96S21 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.58
RAB40CQ96S21 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.46□□□□□ -0.58
RAB40CQ96S21 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
RAB40CQ96S21 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB40CQ96S21 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB40CQ96S21 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB40CQ96S21 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
RAB40CQ96S21 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
RAB40CQ96S21 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 REXO1L6P-201ENST00000603433 1515 ntBASIC11.45□□□□□ -0.58
RAB40CQ96S21 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 PIN1P1-201ENST00000412108 996 ntBASIC11.45□□□□□ -0.58
RAB40CQ96S21 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.45□□□□□ -0.58
RAB40CQ96S21 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 TERF1P3-201ENST00000505638 1227 ntBASIC11.45□□□□□ -0.58
RAB40CQ96S21 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms