Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.54□□□□□ -0.4
RFT1Q96AA3 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 AC027369.3-201ENST00000530465 3707 ntBASIC12.54□□□□□ -0.4
RFT1Q96AA3 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 AP006294.1-201ENST00000415407 339 ntBASIC12.54□□□□□ -0.4
RFT1Q96AA3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 AC106820.3-201ENST00000561653 397 ntBASIC12.54□□□□□ -0.4
RFT1Q96AA3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 MIR4683-201ENST00000579659 81 ntBASIC12.54□□□□□ -0.4
RFT1Q96AA3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 BX088702.1-201ENST00000610784 235 ntBASIC12.54□□□□□ -0.4
RFT1Q96AA3 AC004623.1-201ENST00000624592 2127 ntBASIC12.54□□□□□ -0.4
RFT1Q96AA3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 AC022400.8-201ENST00000623453 3599 ntBASIC12.54□□□□□ -0.4
RFT1Q96AA3 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.54□□□□□ -0.4
RFT1Q96AA3 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 AP000593.2-201ENST00000542775 1433 ntBASIC12.54□□□□□ -0.4
RFT1Q96AA3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RFT1Q96AA3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 POM121L4P-202ENST00000427789 1891 ntBASIC12.53□□□□□ -0.4
RFT1Q96AA3 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 USP17L6P-201ENST00000382470 1197 ntBASIC12.53□□□□□ -0.4
RFT1Q96AA3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 AK2P2-201ENST00000439142 405 ntBASIC12.53□□□□□ -0.4
RFT1Q96AA3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 AP001889.1-201ENST00000525414 633 ntBASIC12.53□□□□□ -0.4
RFT1Q96AA3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RFT1Q96AA3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RFT1Q96AA3 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms