Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CU633904.3-201ENST00000624042 1029 ntBASIC12.34□□□□□ -0.43
TMEM54Q969K7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 TBC1D3J-201ENST00000620719 1426 ntBASIC12.34□□□□□ -0.43
TMEM54Q969K7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 TEKT4P2-202ENST00000559466 1312 ntBASIC12.34□□□□□ -0.43
TMEM54Q969K7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM54Q969K7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM54Q969K7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
TMEM54Q969K7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
TMEM54Q969K7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM54Q969K7 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM54Q969K7 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM54Q969K7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.43
TMEM54Q969K7 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 AC104581.4-201ENST00000623126 3052 ntBASIC12.33□□□□□ -0.44
TMEM54Q969K7 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 FTH1P22-201ENST00000456305 520 ntBASIC12.33□□□□□ -0.44
TMEM54Q969K7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 AC095040.1-201ENST00000513286 675 ntBASIC12.33□□□□□ -0.44
TMEM54Q969K7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 MIR3940-201ENST00000579148 102 ntBASIC12.33□□□□□ -0.44
TMEM54Q969K7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
TMEM54Q969K7 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM54Q969K7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 CAP2P1-201ENST00000557743 1390 ntBASIC12.32□□□□□ -0.44
TMEM54Q969K7 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM54Q969K7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TMEM54Q969K7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms