Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 RN7SL832P-201ENST00000607781 1756 ntBASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 AL035414.1-201ENST00000451327 857 ntBASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 AC008825.2-201ENST00000603374 718 ntBASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 MIR6074-201ENST00000612054 107 ntBASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 AL805961.2-201ENST00000642139 4817 ntBASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AC011498.7-201ENST00000624986 2027 ntBASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 BRWD1P1-201ENST00000401091 371 ntBASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AC010141.1-201ENST00000411585 623 ntBASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 BTBD6P1-201ENST00000412176 1267 ntBASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AC100827.2-201ENST00000563214 1194 ntBASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 DUX4L46-201ENST00000566845 751 ntBASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 AC073869.1-201ENST00000415574 2762 ntBASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP61Q8NHU2 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 AC072061.1-201ENST00000569710 2234 ntBASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 KRT8P28-201ENST00000433288 1390 ntBASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms