Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 SSR4P1-201ENST00000415143 412 ntBASIC10.53□□□□□ -0.72
NUP35Q8NFH5 HMGA1P1-201ENST00000415560 1062 ntBASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AC134915.1-201ENST00000426461 574 ntBASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 KRT18P58-201ENST00000527480 1120 ntBASIC10.53□□□□□ -0.72
NUP35Q8NFH5 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AC069262.1-201ENST00000539058 672 ntBASIC10.53□□□□□ -0.72
NUP35Q8NFH5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 BRI3BPP1-201ENST00000594224 787 ntBASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AP005019.2-201ENST00000615104 511 ntBASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 FLJ30679-201ENST00000624773 1980 ntBASIC10.53□□□□□ -0.72
NUP35Q8NFH5 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AGER-206ENST00000375070 1463 ntTSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AC026992.2-203ENST00000563004 2419 ntBASIC10.53□□□□□ -0.72
NUP35Q8NFH5 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
NUP35Q8NFH5 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 C1QBPP1-201ENST00000400117 770 ntBASIC10.52□□□□□ -0.73
NUP35Q8NFH5 MIR940-201ENST00000401276 94 ntBASIC10.52□□□□□ -0.73
NUP35Q8NFH5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC10.52□□□□□ -0.73
NUP35Q8NFH5 AC068587.3-201ENST00000526613 355 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms