Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 MARK2P9-201ENST00000430958 1727 ntBASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 KRT8P21-201ENST00000430398 1491 ntBASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 FAM90A12P-201ENST00000519497 2375 ntBASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 FAM90A24P-201ENST00000520792 2369 ntBASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 AC099521.3-201ENST00000624251 2938 ntBASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 AC005562.1-201ENST00000583030 3219 ntBASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 AGER-203ENST00000375065 665 ntTSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 HNRNPA1P32-201ENST00000396326 963 ntBASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 RN7SL277P-201ENST00000481521 288 ntBASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 RN7SL219P-201ENST00000582872 296 ntBASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 AL022334.2-201ENST00000610000 484 ntBASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 BRD7P5-201ENST00000299197 1822 ntBASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TTC9CQ8N5M4 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms