Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.97□□□□□ -0.17
CCDC153Q494R4 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC153Q494R4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC153Q494R4 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.97□□□□□ -0.17
CCDC153Q494R4 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCDC153Q494R4 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC153Q494R4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 CYP4F23P-201ENST00000593402 1579 ntBASIC13.96□□□□□ -0.17
CCDC153Q494R4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 LINC00638-201ENST00000555578 2518 ntBASIC13.96□□□□□ -0.17
CCDC153Q494R4 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 MIR4783-201ENST00000580343 82 ntBASIC13.96□□□□□ -0.17
CCDC153Q494R4 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.96□□□□□ -0.17
CCDC153Q494R4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC153Q494R4 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC153Q494R4 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.96□□□□□ -0.18
CCDC153Q494R4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.96□□□□□ -0.18
CCDC153Q494R4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC153Q494R4 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.96□□□□□ -0.18
CCDC153Q494R4 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
CCDC153Q494R4 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC153Q494R4 LINC00567-201ENST00000569854 3409 ntBASIC13.96□□□□□ -0.18
CCDC153Q494R4 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC153Q494R4 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC153Q494R4 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC153Q494R4 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC153Q494R4 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC153Q494R4 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC153Q494R4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC153Q494R4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 KRT18P36-201ENST00000411618 1276 ntBASIC13.95□□□□□ -0.18
CCDC153Q494R4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC153Q494R4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 KRT43P-201ENST00000434019 910 ntBASIC13.95□□□□□ -0.18
CCDC153Q494R4 POM121L10P-201ENST00000436994 1285 ntBASIC13.95□□□□□ -0.18
CCDC153Q494R4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC153Q494R4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC153Q494R4 AL160314.3-201ENST00000556041 767 ntBASIC13.95□□□□□ -0.18
CCDC153Q494R4 AC005962.1-201ENST00000584100 773 ntBASIC13.95□□□□□ -0.18
CCDC153Q494R4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 Z98885.3-201ENST00000624882 1757 ntBASIC13.95□□□□□ -0.18
CCDC153Q494R4 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC153Q494R4 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC153Q494R4 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms