Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 RN7SL720P-201ENST00000488178 304 ntBASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 AC145285.5-201ENST00000562217 361 ntBASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 FGFR3P5-201ENST00000564496 886 ntBASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 AC132825.4-202ENST00000578792 434 ntBASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 AC009145.4-201ENST00000625119 1294 ntBASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRICKLE4Q2TBC4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 NRADDP-202ENST00000641269 1585 ntBASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 Z98885.3-201ENST00000624882 1757 ntBASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 BCYRN1-201ENST00000418539 200 ntBASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 CEP164P1-201ENST00000455142 418 ntBASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 SIGLEC22P-201ENST00000599104 714 ntBASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms