Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC61A1P61619 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC61A1P61619 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC61A1P61619 AL591846.1-201ENST00000451736 433 ntBASIC12.44□□□□□ -0.42
SEC61A1P61619 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC61A1P61619 ZNF767P-206ENST00000513792 565 ntBASIC12.44□□□□□ -0.42
SEC61A1P61619 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC61A1P61619 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC61A1P61619 ZACNP1-201ENST00000612259 710 ntBASIC12.44□□□□□ -0.42
SEC61A1P61619 AP001002.3-201ENST00000623482 206 ntBASIC12.44□□□□□ -0.42
SEC61A1P61619 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 DLX4-206ENST00000611342 1662 ntBASIC12.44□□□□□ -0.42
SEC61A1P61619 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC61A1P61619 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SEC61A1P61619 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC61A1P61619 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
SEC61A1P61619 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SEC61A1P61619 NCLP1-201ENST00000445357 1963 ntBASIC12.43□□□□□ -0.42
SEC61A1P61619 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61A1P61619 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61A1P61619 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61A1P61619 AL022323.5-201ENST00000624101 2059 ntBASIC12.43□□□□□ -0.42
SEC61A1P61619 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.43□□□□□ -0.42
SEC61A1P61619 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 RN7SKP230-201ENST00000365642 335 ntBASIC12.43□□□□□ -0.42
SEC61A1P61619 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SEC61A1P61619 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 RN7SKP175-201ENST00000408472 289 ntBASIC12.43□□□□□ -0.42
SEC61A1P61619 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.43□□□□□ -0.42
SEC61A1P61619 CHMP1AP1-201ENST00000445563 662 ntBASIC12.43□□□□□ -0.42
SEC61A1P61619 HSPB1P2-201ENST00000448722 546 ntBASIC12.43□□□□□ -0.42
SEC61A1P61619 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.43□□□□□ -0.42
SEC61A1P61619 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.43□□□□□ -0.42
SEC61A1P61619 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.43□□□□□ -0.42
SEC61A1P61619 AC104982.3-201ENST00000581995 514 ntBASIC12.43□□□□□ -0.42
SEC61A1P61619 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61A1P61619 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.43□□□□□ -0.42
SEC61A1P61619 AC138696.2-201ENST00000607376 223 ntBASIC12.43□□□□□ -0.42
SEC61A1P61619 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms