Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.71□□□□□ -0.22
AP1S2P56377 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
AP1S2P56377 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
AP1S2P56377 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.7□□□□□ -0.22
AP1S2P56377 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 AC093462.1-201ENST00000621167 1683 ntBASIC13.7□□□□□ -0.22
AP1S2P56377 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 AC067931.2-201ENST00000623655 2003 ntBASIC13.7□□□□□ -0.22
AP1S2P56377 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 AC105206.1-202ENST00000314927 2368 ntBASIC13.7□□□□□ -0.22
AP1S2P56377 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
AP1S2P56377 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
AP1S2P56377 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 GPAA1P2-201ENST00000417923 928 ntBASIC13.7□□□□□ -0.22
AP1S2P56377 ISCA2P1-201ENST00000425548 448 ntBASIC13.7□□□□□ -0.22
AP1S2P56377 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.7□□□□□ -0.22
AP1S2P56377 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 AKR7A2P1-201ENST00000460134 915 ntBASIC13.7□□□□□ -0.22
AP1S2P56377 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.7□□□□□ -0.22
AP1S2P56377 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.7□□□□□ -0.22
AP1S2P56377 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 NDUFB10P1-201ENST00000567319 521 ntBASIC13.7□□□□□ -0.22
AP1S2P56377 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
AP1S2P56377 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.7□□□□□ -0.22
AP1S2P56377 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.7□□□□□ -0.22
AP1S2P56377 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.7□□□□□ -0.22
AP1S2P56377 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.7□□□□□ -0.22
AP1S2P56377 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 AL358781.1-202ENST00000321081 1360 ntBASIC13.7□□□□□ -0.22
AP1S2P56377 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S2P56377 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP1S2P56377 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AP1S2P56377 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.69□□□□□ -0.22
AP1S2P56377 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AP1S2P56377 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.69□□□□□ -0.22
AP1S2P56377 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.69□□□□□ -0.22
AP1S2P56377 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.69□□□□□ -0.22
AP1S2P56377 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
AP1S2P56377 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.69□□□□□ -0.22
AP1S2P56377 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.69□□□□□ -0.22
AP1S2P56377 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 AC006335.1-201ENST00000445200 547 ntBASIC13.69□□□□□ -0.22
AP1S2P56377 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.69□□□□□ -0.22
AP1S2P56377 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.69□□□□□ -0.22
AP1S2P56377 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.69□□□□□ -0.22
AP1S2P56377 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 ALG1L13P-202ENST00000519320 584 ntBASIC13.69□□□□□ -0.22
AP1S2P56377 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.69□□□□□ -0.22
AP1S2P56377 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
AP1S2P56377 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.69□□□□□ -0.22
AP1S2P56377 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.69□□□□□ -0.22
AP1S2P56377 MIR6769A-201ENST00000617340 73 ntBASIC13.69□□□□□ -0.22
AP1S2P56377 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S2P56377 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
AP1S2P56377 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms