Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TNNI2P48788 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.61■□□□□ 0.25
TNNI2P48788 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TNNI2P48788 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TNNI2P48788 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.6■□□□□ 0.25
TNNI2P48788 RN7SL288P-201ENST00000490496 291 ntBASIC16.6■□□□□ 0.25
TNNI2P48788 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.6■□□□□ 0.25
TNNI2P48788 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TNNI2P48788 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 AC092862.1-201ENST00000541534 533 ntBASIC16.6■□□□□ 0.25
TNNI2P48788 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.6■□□□□ 0.25
TNNI2P48788 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 AL136982.5-201ENST00000605222 294 ntBASIC16.6■□□□□ 0.25
TNNI2P48788 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.6■□□□□ 0.25
TNNI2P48788 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TNNI2P48788 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TNNI2P48788 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
TNNI2P48788 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TNNI2P48788 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.6■□□□□ 0.25
TNNI2P48788 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TNNI2P48788 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TNNI2P48788 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNI2P48788 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.59■□□□□ 0.25
TNNI2P48788 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNI2P48788 AC023908.3-201ENST00000564211 3047 ntBASIC16.59■□□□□ 0.25
TNNI2P48788 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
TNNI2P48788 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.59■□□□□ 0.25
TNNI2P48788 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNI2P48788 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNI2P48788 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNI2P48788 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNI2P48788 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TNNI2P48788 PTGER4P2-201ENST00000328411 252 ntBASIC16.59■□□□□ 0.25
TNNI2P48788 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNI2P48788 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.59■□□□□ 0.25
TNNI2P48788 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNNI2P48788 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNI2P48788 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC16.59■□□□□ 0.25
TNNI2P48788 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.59■□□□□ 0.25
TNNI2P48788 PTGER4P3-201ENST00000458150 252 ntBASIC16.59■□□□□ 0.25
TNNI2P48788 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.59■□□□□ 0.25
TNNI2P48788 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.59■□□□□ 0.25
TNNI2P48788 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNNI2P48788 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.59■□□□□ 0.25
TNNI2P48788 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
TNNI2P48788 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TNNI2P48788 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.59■□□□□ 0.25
TNNI2P48788 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.59■□□□□ 0.25
TNNI2P48788 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.59■□□□□ 0.25
TNNI2P48788 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms