Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIA1P42261 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIA1P42261 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GRIA1P42261 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIA1P42261 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GRIA1P42261 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC14.26□□□□□ -0.13
GRIA1P42261 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIA1P42261 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
GRIA1P42261 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.25□□□□□ -0.13
GRIA1P42261 KRT8P21-201ENST00000430398 1491 ntBASIC14.25□□□□□ -0.13
GRIA1P42261 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC14.25□□□□□ -0.13
GRIA1P42261 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.25□□□□□ -0.13
GRIA1P42261 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.25□□□□□ -0.13
GRIA1P42261 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.25□□□□□ -0.13
GRIA1P42261 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
GRIA1P42261 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GRIA1P42261 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.25□□□□□ -0.13
GRIA1P42261 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
GRIA1P42261 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
GRIA1P42261 MIR1908-201ENST00000410394 80 ntBASIC14.25□□□□□ -0.13
GRIA1P42261 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.25□□□□□ -0.13
GRIA1P42261 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.25□□□□□ -0.13
GRIA1P42261 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.25□□□□□ -0.13
GRIA1P42261 AC116345.2-201ENST00000512837 523 ntBASIC14.25□□□□□ -0.13
GRIA1P42261 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.25□□□□□ -0.13
GRIA1P42261 AC005740.1-201ENST00000515639 522 ntBASIC14.25□□□□□ -0.13
GRIA1P42261 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.25□□□□□ -0.13
GRIA1P42261 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.25□□□□□ -0.13
GRIA1P42261 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.25□□□□□ -0.13
GRIA1P42261 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.25□□□□□ -0.13
GRIA1P42261 AL451050.2-201ENST00000606967 682 ntBASIC14.25□□□□□ -0.13
GRIA1P42261 AL033527.4-201ENST00000641026 673 ntBASIC14.25□□□□□ -0.13
GRIA1P42261 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
GRIA1P42261 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
GRIA1P42261 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.25□□□□□ -0.13
GRIA1P42261 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
GRIA1P42261 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.25□□□□□ -0.13
GRIA1P42261 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GRIA1P42261 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.25□□□□□ -0.13
GRIA1P42261 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GRIA1P42261 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.24□□□□□ -0.13
GRIA1P42261 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
GRIA1P42261 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.24□□□□□ -0.13
GRIA1P42261 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
GRIA1P42261 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.24□□□□□ -0.13
GRIA1P42261 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
GRIA1P42261 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 GK-202ENST00000378941 458 ntTSL 3 BASIC14.24□□□□□ -0.13
GRIA1P42261 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.24□□□□□ -0.13
GRIA1P42261 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.24□□□□□ -0.13
GRIA1P42261 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.24□□□□□ -0.13
GRIA1P42261 RN7SL530P-201ENST00000485097 298 ntBASIC14.24□□□□□ -0.13
GRIA1P42261 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GRIA1P42261 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
GRIA1P42261 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.24□□□□□ -0.13
GRIA1P42261 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.24□□□□□ -0.13
GRIA1P42261 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms