Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN1P35523 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN1P35523 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CLCN1P35523 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.06■□□□□ 0.16
CLCN1P35523 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.06■□□□□ 0.16
CLCN1P35523 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.06■□□□□ 0.16
CLCN1P35523 KRT18P25-201ENST00000508931 1278 ntBASIC16.06■□□□□ 0.16
CLCN1P35523 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLCN1P35523 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN1P35523 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN1P35523 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN1P35523 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLCN1P35523 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN1P35523 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN1P35523 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 DBIL5P-203ENST00000536214 2677 ntBASIC16.06■□□□□ 0.16
CLCN1P35523 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CLCN1P35523 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CLCN1P35523 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CLCN1P35523 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN1P35523 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN1P35523 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLCN1P35523 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN1P35523 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLCN1P35523 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 AC108024.1-201ENST00000626286 1721 ntBASIC16.05■□□□□ 0.16
CLCN1P35523 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN1P35523 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCN1P35523 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLCN1P35523 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLCN1P35523 AC003102.2-201ENST00000589195 1469 ntBASIC16.05■□□□□ 0.16
CLCN1P35523 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN1P35523 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 BAATP1-201ENST00000412284 1225 ntBASIC16.05■□□□□ 0.16
CLCN1P35523 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 AC012441.1-201ENST00000446669 685 ntBASIC16.05■□□□□ 0.16
CLCN1P35523 FO681548.1-201ENST00000455617 1132 ntBASIC16.05■□□□□ 0.16
CLCN1P35523 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLCN1P35523 AC010319.3-201ENST00000597028 470 ntBASIC16.05■□□□□ 0.16
CLCN1P35523 LINC02084-201ENST00000606069 1096 ntBASIC16.05■□□□□ 0.16
CLCN1P35523 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.05■□□□□ 0.16
CLCN1P35523 AC010503.4-201ENST00000615487 688 ntBASIC16.05■□□□□ 0.16
CLCN1P35523 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN1P35523 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN1P35523 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 HSPA8P9-201ENST00000485881 1943 ntBASIC16.05■□□□□ 0.16
CLCN1P35523 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN1P35523 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CLCN1P35523 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 AC007326.2-201ENST00000624224 7579 ntBASIC16.05■□□□□ 0.16
CLCN1P35523 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN1P35523 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN1P35523 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CLCN1P35523 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN1P35523 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN1P35523 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN1P35523 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC16.04■□□□□ 0.16
CLCN1P35523 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CLCN1P35523 AC134312.5-201ENST00000568031 1313 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms