Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RXRBP28702 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 AKR1C5P-201ENST00000427165 609 ntBASIC17.76■□□□□ 0.43
RXRBP28702 AC007279.1-201ENST00000448547 837 ntBASIC17.76■□□□□ 0.43
RXRBP28702 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC17.76■□□□□ 0.43
RXRBP28702 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RXRBP28702 AL049871.1-201ENST00000557475 880 ntTSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC17.76■□□□□ 0.43
RXRBP28702 AC091132.3-201ENST00000579701 470 ntBASIC17.76■□□□□ 0.43
RXRBP28702 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.76■□□□□ 0.43
RXRBP28702 AC138645.1-201ENST00000582765 470 ntBASIC17.76■□□□□ 0.43
RXRBP28702 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 TNFSF13-209ENST00000625791 955 ntTSL 2 BASIC17.76■□□□□ 0.43
RXRBP28702 AL139424.3-202ENST00000641619 917 ntBASIC17.76■□□□□ 0.43
RXRBP28702 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
RXRBP28702 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RXRBP28702 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RXRBP28702 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.75■□□□□ 0.43
RXRBP28702 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RXRBP28702 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
RXRBP28702 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC17.75■□□□□ 0.43
RXRBP28702 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.75■□□□□ 0.43
RXRBP28702 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 Z97653.2-201ENST00000623057 1418 ntBASIC17.75■□□□□ 0.43
RXRBP28702 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RXRBP28702 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RXRBP28702 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC17.75■□□□□ 0.43
RXRBP28702 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 KRT41P-201ENST00000393988 1293 ntBASIC17.75■□□□□ 0.43
RXRBP28702 AC007322.2-201ENST00000414540 605 ntBASIC17.75■□□□□ 0.43
RXRBP28702 AC079944.2-201ENST00000478867 734 ntBASIC17.75■□□□□ 0.43
RXRBP28702 RPL18P1-201ENST00000497218 552 ntBASIC17.75■□□□□ 0.43
RXRBP28702 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
RXRBP28702 RN7SL750P-201ENST00000582814 238 ntBASIC17.75■□□□□ 0.43
RXRBP28702 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC17.75■□□□□ 0.43
RXRBP28702 AL117379.1-201ENST00000619319 677 ntBASIC17.75■□□□□ 0.43
RXRBP28702 RPS9-213ENST00000626547 476 ntTSL 2 BASIC17.75■□□□□ 0.43
RXRBP28702 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.75■□□□□ 0.43
RXRBP28702 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RXRBP28702 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RXRBP28702 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC17.74■□□□□ 0.43
RXRBP28702 CYP2T1P-202ENST00000641596 2535 ntBASIC17.74■□□□□ 0.43
RXRBP28702 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC17.74■□□□□ 0.43
RXRBP28702 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC17.74■□□□□ 0.43
RXRBP28702 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RXRBP28702 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC17.74■□□□□ 0.43
RXRBP28702 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RXRBP28702 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC17.74■□□□□ 0.43
RXRBP28702 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC17.74■□□□□ 0.43
RXRBP28702 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC17.74■□□□□ 0.43
RXRBP28702 SERF2-204ENST00000402131 586 ntTSL 2 BASIC17.74■□□□□ 0.43
RXRBP28702 TEDDM2P-201ENST00000414169 786 ntBASIC17.74■□□□□ 0.43
RXRBP28702 AC087163.1-201ENST00000430089 381 ntBASIC17.74■□□□□ 0.43
RXRBP28702 AC010677.1-201ENST00000441690 412 ntBASIC17.74■□□□□ 0.43
RXRBP28702 AC092284.1-201ENST00000511386 1289 ntBASIC17.74■□□□□ 0.43
RXRBP28702 BCRP5-201ENST00000514371 253 ntBASIC17.74■□□□□ 0.43
RXRBP28702 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC17.74■□□□□ 0.43
RXRBP28702 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RXRBP28702 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RXRBP28702 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms