Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CTLA4P16410 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CTLA4P16410 COL6A4P2-202ENST00000504443 2753 ntBASIC12.49□□□□□ -0.41
CTLA4P16410 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.49□□□□□ -0.41
CTLA4P16410 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.49□□□□□ -0.41
CTLA4P16410 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.49□□□□□ -0.41
CTLA4P16410 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 AL355102.3-201ENST00000554299 1678 ntBASIC12.49□□□□□ -0.41
CTLA4P16410 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 KRT8P21-201ENST00000430398 1491 ntBASIC12.49□□□□□ -0.41
CTLA4P16410 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.49□□□□□ -0.41
CTLA4P16410 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 RNA5SP359-201ENST00000364838 113 ntBASIC12.49□□□□□ -0.41
CTLA4P16410 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.49□□□□□ -0.41
CTLA4P16410 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.49□□□□□ -0.41
CTLA4P16410 NKAIN1P1-201ENST00000435754 582 ntBASIC12.49□□□□□ -0.41
CTLA4P16410 AC104306.2-201ENST00000451877 341 ntBASIC12.49□□□□□ -0.41
CTLA4P16410 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.49□□□□□ -0.41
CTLA4P16410 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CTLA4P16410 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.49□□□□□ -0.41
CTLA4P16410 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.49□□□□□ -0.41
CTLA4P16410 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTLA4P16410 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CTLA4P16410 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CTLA4P16410 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CTLA4P16410 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.48□□□□□ -0.41
CTLA4P16410 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.48□□□□□ -0.41
CTLA4P16410 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.48□□□□□ -0.41
CTLA4P16410 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.48□□□□□ -0.41
CTLA4P16410 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CTLA4P16410 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CTLA4P16410 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTLA4P16410 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTLA4P16410 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.48□□□□□ -0.41
CTLA4P16410 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTLA4P16410 NUTM2HP-201ENST00000442076 2498 ntBASIC12.48□□□□□ -0.41
CTLA4P16410 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTLA4P16410 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.48□□□□□ -0.41
CTLA4P16410 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTLA4P16410 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.48□□□□□ -0.41
CTLA4P16410 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CTLA4P16410 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTLA4P16410 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTLA4P16410 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CTLA4P16410 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.48□□□□□ -0.41
CTLA4P16410 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.48□□□□□ -0.41
CTLA4P16410 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CTLA4P16410 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CTLA4P16410 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.48□□□□□ -0.41
CTLA4P16410 OR8T1P-201ENST00000421347 918 ntBASIC12.48□□□□□ -0.41
CTLA4P16410 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms