Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.8□□□□□ -0.2
PCNAP12004 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PCNAP12004 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PCNAP12004 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.8□□□□□ -0.2
PCNAP12004 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PCNAP12004 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 KRT18P36-201ENST00000411618 1276 ntBASIC13.8□□□□□ -0.2
PCNAP12004 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.8□□□□□ -0.2
PCNAP12004 OR2R1P-201ENST00000441404 914 ntBASIC13.8□□□□□ -0.2
PCNAP12004 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.8□□□□□ -0.2
PCNAP12004 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.8□□□□□ -0.2
PCNAP12004 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
PCNAP12004 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.8□□□□□ -0.2
PCNAP12004 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.8□□□□□ -0.2
PCNAP12004 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.8□□□□□ -0.2
PCNAP12004 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.8□□□□□ -0.2
PCNAP12004 AC091271.1-201ENST00000611877 1162 ntBASIC13.8□□□□□ -0.2
PCNAP12004 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.8□□□□□ -0.2
PCNAP12004 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.8□□□□□ -0.2
PCNAP12004 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PCNAP12004 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.8□□□□□ -0.2
PCNAP12004 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 AHCYP4-201ENST00000419201 1315 ntBASIC13.8□□□□□ -0.2
PCNAP12004 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PCNAP12004 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PCNAP12004 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.8□□□□□ -0.2
PCNAP12004 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PCNAP12004 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.8□□□□□ -0.2
PCNAP12004 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.8□□□□□ -0.2
PCNAP12004 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCNAP12004 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PCNAP12004 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 AC011700.1-201ENST00000610409 2627 ntBASIC13.79□□□□□ -0.2
PCNAP12004 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PCNAP12004 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
PCNAP12004 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.79□□□□□ -0.2
PCNAP12004 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PCNAP12004 AC005014.1-201ENST00000432006 2976 ntBASIC13.79□□□□□ -0.2
PCNAP12004 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PCNAP12004 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.79□□□□□ -0.2
PCNAP12004 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.79□□□□□ -0.2
PCNAP12004 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.79□□□□□ -0.2
PCNAP12004 AL928654.5-201ENST00000624831 2501 ntBASIC13.79□□□□□ -0.2
PCNAP12004 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
PCNAP12004 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.79□□□□□ -0.2
PCNAP12004 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PCNAP12004 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.79□□□□□ -0.2
PCNAP12004 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.79□□□□□ -0.2
PCNAP12004 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.79□□□□□ -0.2
PCNAP12004 BNIP3P13-201ENST00000599968 566 ntBASIC13.79□□□□□ -0.2
PCNAP12004 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.79□□□□□ -0.2
PCNAP12004 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.79□□□□□ -0.2
PCNAP12004 AC005695.3-201ENST00000614522 232 ntBASIC13.79□□□□□ -0.2
PCNAP12004 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.79□□□□□ -0.2
PCNAP12004 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PCNAP12004 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.79□□□□□ -0.2
PCNAP12004 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.79□□□□□ -0.2
PCNAP12004 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.79□□□□□ -0.2
PCNAP12004 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PCNAP12004 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCNAP12004 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms