Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC11.04□□□□□ -0.64
CD28P10747 AC007952.4-201ENST00000573866 637 ntBASIC11.04□□□□□ -0.64
CD28P10747 RN7SL357P-201ENST00000581065 298 ntBASIC11.04□□□□□ -0.64
CD28P10747 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC11.04□□□□□ -0.64
CD28P10747 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC11.04□□□□□ -0.64
CD28P10747 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC11.04□□□□□ -0.64
CD28P10747 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.04□□□□□ -0.64
CD28P10747 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
CD28P10747 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC11.04□□□□□ -0.64
CD28P10747 AC073957.3-201ENST00000609998 6758 ntBASIC11.04□□□□□ -0.64
CD28P10747 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.04□□□□□ -0.64
CD28P10747 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC11.04□□□□□ -0.64
CD28P10747 AC117489.1-201ENST00000625169 3217 ntBASIC11.04□□□□□ -0.64
CD28P10747 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CD28P10747 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.04□□□□□ -0.64
CD28P10747 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 AC092053.3-201ENST00000641308 4975 ntBASIC11.04□□□□□ -0.64
CD28P10747 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CD28P10747 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CD28P10747 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.04□□□□□ -0.64
CD28P10747 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.03□□□□□ -0.64
CD28P10747 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.03□□□□□ -0.64
CD28P10747 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
CD28P10747 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 AC005912.2-201ENST00000619492 2400 ntBASIC11.03□□□□□ -0.64
CD28P10747 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 CICP4-201ENST00000447359 2812 ntBASIC11.03□□□□□ -0.64
CD28P10747 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 BAK1P1-201ENST00000317045 636 ntBASIC11.03□□□□□ -0.64
CD28P10747 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC11.03□□□□□ -0.64
CD28P10747 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 AC084752.1-201ENST00000509766 622 ntBASIC11.03□□□□□ -0.64
CD28P10747 RNA5SP406-201ENST00000516106 112 ntBASIC11.03□□□□□ -0.64
CD28P10747 AC068867.1-201ENST00000559855 150 ntBASIC11.03□□□□□ -0.64
CD28P10747 AC145285.5-201ENST00000562217 361 ntBASIC11.03□□□□□ -0.64
CD28P10747 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC11.03□□□□□ -0.64
CD28P10747 AC140113.1-201ENST00000603467 169 ntBASIC11.03□□□□□ -0.64
CD28P10747 AC007250.1-201ENST00000608934 338 ntBASIC11.03□□□□□ -0.64
CD28P10747 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
CD28P10747 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CD28P10747 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CD28P10747 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
CD28P10747 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.02□□□□□ -0.64
CD28P10747 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CD28P10747 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.02□□□□□ -0.64
CD28P10747 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CD28P10747 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
CD28P10747 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CD28P10747 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CD28P10747 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CD28P10747 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
CD28P10747 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CD28P10747 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms