Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
HTR1AP08908 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
HTR1AP08908 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
HTR1AP08908 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.85□□□□□ -0.35
HTR1AP08908 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.85□□□□□ -0.35
HTR1AP08908 AL162726.2-201ENST00000438986 1017 ntBASIC12.85□□□□□ -0.35
HTR1AP08908 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.85□□□□□ -0.35
HTR1AP08908 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
HTR1AP08908 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.85□□□□□ -0.35
HTR1AP08908 AC022137.2-201ENST00000503482 481 ntBASIC12.85□□□□□ -0.35
HTR1AP08908 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.85□□□□□ -0.35
HTR1AP08908 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HTR1AP08908 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.85□□□□□ -0.35
HTR1AP08908 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 CLUHP6-201ENST00000580789 941 ntBASIC12.85□□□□□ -0.35
HTR1AP08908 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.85□□□□□ -0.35
HTR1AP08908 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
HTR1AP08908 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HTR1AP08908 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
HTR1AP08908 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.85□□□□□ -0.35
HTR1AP08908 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HTR1AP08908 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.85□□□□□ -0.35
HTR1AP08908 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HTR1AP08908 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 AL358781.1-202ENST00000321081 1360 ntBASIC12.84□□□□□ -0.35
HTR1AP08908 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 AL391825.1-201ENST00000457671 1364 ntBASIC12.84□□□□□ -0.35
HTR1AP08908 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 POM121L8P-201ENST00000417732 1281 ntBASIC12.84□□□□□ -0.35
HTR1AP08908 AC098850.1-201ENST00000419919 790 ntBASIC12.84□□□□□ -0.35
HTR1AP08908 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.84□□□□□ -0.35
HTR1AP08908 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.84□□□□□ -0.35
HTR1AP08908 POM121L9P-203ENST00000441984 1285 ntBASIC12.84□□□□□ -0.35
HTR1AP08908 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HTR1AP08908 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.84□□□□□ -0.35
HTR1AP08908 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.84□□□□□ -0.35
HTR1AP08908 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.84□□□□□ -0.35
HTR1AP08908 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.84□□□□□ -0.35
HTR1AP08908 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.84□□□□□ -0.35
HTR1AP08908 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms