Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC15.83■□□□□ 0.13
TPM3P06753 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TPM3P06753 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TPM3P06753 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM3P06753 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM3P06753 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.83■□□□□ 0.12
TPM3P06753 BAATP1-201ENST00000412284 1225 ntBASIC15.83■□□□□ 0.12
TPM3P06753 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.83■□□□□ 0.12
TPM3P06753 SPTLC1P1-201ENST00000447199 261 ntBASIC15.83■□□□□ 0.12
TPM3P06753 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.83■□□□□ 0.12
TPM3P06753 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.83■□□□□ 0.12
TPM3P06753 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.83■□□□□ 0.12
TPM3P06753 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.83■□□□□ 0.12
TPM3P06753 AL132655.2-201ENST00000596276 594 ntBASIC15.83■□□□□ 0.12
TPM3P06753 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 AC134312.5-201ENST00000568031 1313 ntBASIC15.83■□□□□ 0.12
TPM3P06753 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TPM3P06753 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 AC007541.1-201ENST00000570282 1469 ntBASIC15.83■□□□□ 0.12
TPM3P06753 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TPM3P06753 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM3P06753 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.83■□□□□ 0.12
TPM3P06753 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM3P06753 AL138709.1-201ENST00000614840 1693 ntBASIC15.83■□□□□ 0.12
TPM3P06753 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM3P06753 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 SHC1P1-201ENST00000425230 1745 ntBASIC15.82■□□□□ 0.12
TPM3P06753 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC15.82■□□□□ 0.12
TPM3P06753 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TPM3P06753 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TPM3P06753 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TPM3P06753 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.82■□□□□ 0.12
TPM3P06753 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM3P06753 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.82■□□□□ 0.12
TPM3P06753 CICP12-201ENST00000455801 843 ntBASIC15.82■□□□□ 0.12
TPM3P06753 ELK1P1-201ENST00000485699 580 ntBASIC15.82■□□□□ 0.12
TPM3P06753 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TPM3P06753 RNA5SP421-201ENST00000516864 134 ntBASIC15.82■□□□□ 0.12
TPM3P06753 PTP4A1P2-201ENST00000546033 454 ntBASIC15.82■□□□□ 0.12
TPM3P06753 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM3P06753 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.82■□□□□ 0.12
TPM3P06753 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 AC012531.1-201ENST00000562848 2680 ntBASIC15.82■□□□□ 0.12
TPM3P06753 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.82■□□□□ 0.12
TPM3P06753 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM3P06753 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC15.82■□□□□ 0.12
TPM3P06753 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TPM3P06753 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM3P06753 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TPM3P06753 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TPM3P06753 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TPM3P06753 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM3P06753 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM3P06753 AC018445.4-201ENST00000624066 2291 ntBASIC15.82■□□□□ 0.12
TPM3P06753 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TPM3P06753 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM3P06753 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM3P06753 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM3P06753 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TPM3P06753 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM3P06753 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms