Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 BX679664.3-201ENST00000414070 555 ntBASIC10.88□□□□□ -0.67
TRBV12-3P01733 PARVG-202ENST00000415224 999 ntTSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AP000358.1-201ENST00000456260 156 ntBASIC10.88□□□□□ -0.67
TRBV12-3P01733 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AC113935.1-201ENST00000471722 555 ntBASIC10.88□□□□□ -0.67
TRBV12-3P01733 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 SUPT4H1P2-201ENST00000501248 353 ntBASIC10.88□□□□□ -0.67
TRBV12-3P01733 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AL133499.1-201ENST00000596207 608 ntBASIC10.88□□□□□ -0.67
TRBV12-3P01733 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 MARK2P16-201ENST00000605714 1723 ntBASIC10.88□□□□□ -0.67
TRBV12-3P01733 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AC079336.7-201ENST00000623428 1078 ntBASIC10.88□□□□□ -0.67
TRBV12-3P01733 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.88□□□□□ -0.67
TRBV12-3P01733 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AC126335.2-201ENST00000623362 4637 ntBASIC10.88□□□□□ -0.67
TRBV12-3P01733 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 LSS-211ENST00000522411 2523 ntTSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 KRT8P43-201ENST00000406052 1458 ntBASIC10.87□□□□□ -0.67
TRBV12-3P01733 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 CROT-203ENST00000419147 2959 ntTSL 2 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 MIR557-201ENST00000385239 98 ntBASIC10.87□□□□□ -0.67
TRBV12-3P01733 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRBV12-3P01733 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC10.87□□□□□ -0.67
TRBV12-3P01733 AL807761.2-201ENST00000422849 729 ntBASIC10.87□□□□□ -0.67
TRBV12-3P01733 AK2P2-201ENST00000439142 405 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms