Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GPC4O75487 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GPC4O75487 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GPC4O75487 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.2□□□□□ -0.14
GPC4O75487 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.2□□□□□ -0.14
GPC4O75487 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
GPC4O75487 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 AC027612.1-201ENST00000445234 2395 ntBASIC14.19□□□□□ -0.14
GPC4O75487 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
GPC4O75487 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 LAP3P2-201ENST00000454686 1454 ntBASIC14.19□□□□□ -0.14
GPC4O75487 AHCYP4-201ENST00000419201 1315 ntBASIC14.19□□□□□ -0.14
GPC4O75487 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
GPC4O75487 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.19□□□□□ -0.14
GPC4O75487 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GPC4O75487 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.19□□□□□ -0.14
GPC4O75487 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 AC004898.1-201ENST00000451057 766 ntBASIC14.19□□□□□ -0.14
GPC4O75487 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 AC022217.1-201ENST00000521069 738 ntBASIC14.19□□□□□ -0.14
GPC4O75487 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.19□□□□□ -0.14
GPC4O75487 PGAM1P5-201ENST00000548011 764 ntBASIC14.19□□□□□ -0.14
GPC4O75487 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.19□□□□□ -0.14
GPC4O75487 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.19□□□□□ -0.14
GPC4O75487 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.19□□□□□ -0.14
GPC4O75487 AC021016.3-201ENST00000608367 477 ntBASIC14.19□□□□□ -0.14
GPC4O75487 AC090164.2-201ENST00000611487 516 ntBASIC14.19□□□□□ -0.14
GPC4O75487 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.19□□□□□ -0.14
GPC4O75487 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GPC4O75487 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC14.19□□□□□ -0.14
GPC4O75487 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.19□□□□□ -0.14
GPC4O75487 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GPC4O75487 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
GPC4O75487 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.18□□□□□ -0.14
GPC4O75487 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GPC4O75487 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GPC4O75487 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GPC4O75487 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.18□□□□□ -0.14
GPC4O75487 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.18□□□□□ -0.14
GPC4O75487 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.18□□□□□ -0.14
GPC4O75487 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.18□□□□□ -0.14
GPC4O75487 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.18□□□□□ -0.14
GPC4O75487 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
GPC4O75487 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.18□□□□□ -0.14
GPC4O75487 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.18□□□□□ -0.14
GPC4O75487 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.18□□□□□ -0.14
GPC4O75487 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GPC4O75487 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms