Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CHL1O00533 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC17.8■□□□□ 0.44
CHL1O00533 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.8■□□□□ 0.44
CHL1O00533 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC17.8■□□□□ 0.44
CHL1O00533 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC17.8■□□□□ 0.44
CHL1O00533 AC068418.2-201ENST00000577309 3703 ntBASIC17.8■□□□□ 0.44
CHL1O00533 CTBP2P8-201ENST00000422584 1330 ntBASIC17.8■□□□□ 0.44
CHL1O00533 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHL1O00533 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHL1O00533 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHL1O00533 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 TRMT112P3-201ENST00000580149 358 ntBASIC17.8■□□□□ 0.44
CHL1O00533 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHL1O00533 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC17.8■□□□□ 0.44
CHL1O00533 MIR6727-201ENST00000620702 65 ntBASIC17.8■□□□□ 0.44
CHL1O00533 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CHL1O00533 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CHL1O00533 ZNF493-208ENST00000599461 1769 ntBASIC17.8■□□□□ 0.44
CHL1O00533 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHL1O00533 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHL1O00533 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHL1O00533 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.79■□□□□ 0.44
CHL1O00533 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CHL1O00533 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHL1O00533 AC025271.4-201ENST00000621477 1726 ntBASIC17.79■□□□□ 0.44
CHL1O00533 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CHL1O00533 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.79■□□□□ 0.44
CHL1O00533 AC041040.1-201ENST00000425197 460 ntBASIC17.79■□□□□ 0.44
CHL1O00533 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.79■□□□□ 0.44
CHL1O00533 GULOP-201ENST00000454030 748 ntBASIC17.79■□□□□ 0.44
CHL1O00533 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.79■□□□□ 0.44
CHL1O00533 AC093909.3-201ENST00000504783 336 ntBASIC17.79■□□□□ 0.44
CHL1O00533 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.79■□□□□ 0.44
CHL1O00533 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC17.79■□□□□ 0.44
CHL1O00533 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC17.79■□□□□ 0.44
CHL1O00533 LINC00431-202ENST00000636375 159 ntBASIC17.79■□□□□ 0.44
CHL1O00533 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHL1O00533 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CHL1O00533 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC17.79■□□□□ 0.44
CHL1O00533 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHL1O00533 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHL1O00533 AC108024.1-201ENST00000626286 1721 ntBASIC17.78■□□□□ 0.44
CHL1O00533 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC17.78■□□□□ 0.44
CHL1O00533 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHL1O00533 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHL1O00533 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CHL1O00533 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC17.78■□□□□ 0.44
CHL1O00533 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHL1O00533 AC024075.2-201ENST00000598112 1473 ntBASIC17.78■□□□□ 0.44
CHL1O00533 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHL1O00533 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHL1O00533 AGAP12P-201ENST00000585227 2359 ntBASIC17.78■□□□□ 0.44
CHL1O00533 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHL1O00533 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.78■□□□□ 0.44
CHL1O00533 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHL1O00533 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHL1O00533 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC17.78■□□□□ 0.44
CHL1O00533 FAM21EP-201ENST00000417804 985 ntBASIC17.78■□□□□ 0.44
CHL1O00533 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHL1O00533 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.78■□□□□ 0.44
CHL1O00533 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.78■□□□□ 0.44
CHL1O00533 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC17.78■□□□□ 0.44
CHL1O00533 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.78■□□□□ 0.44
CHL1O00533 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHL1O00533 AL451007.2-201ENST00000632004 563 ntBASIC17.78■□□□□ 0.44
CHL1O00533 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.78■□□□□ 0.44
CHL1O00533 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms