Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 AC024075.2-201ENST00000598112 1473 ntBASIC11.32□□□□□ -0.6
UPK2O00526 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 AC005562.1-201ENST00000583030 3219 ntBASIC11.31□□□□□ -0.6
UPK2O00526 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
UPK2O00526 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
UPK2O00526 AC079776.1-201ENST00000401540 1152 ntBASIC11.31□□□□□ -0.6
UPK2O00526 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK2O00526 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK2O00526 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
UPK2O00526 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK2O00526 ACA64.2-201ENST00000459014 129 ntBASIC11.31□□□□□ -0.6
UPK2O00526 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK2O00526 RPSAP36-202ENST00000494591 1261 ntBASIC11.31□□□□□ -0.6
UPK2O00526 CHCHD2P2-201ENST00000503744 321 ntBASIC11.31□□□□□ -0.6
UPK2O00526 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK2O00526 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK2O00526 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK2O00526 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.31□□□□□ -0.6
UPK2O00526 LINC02084-201ENST00000606069 1096 ntBASIC11.31□□□□□ -0.6
UPK2O00526 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
UPK2O00526 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
UPK2O00526 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK2O00526 MARK2P16-201ENST00000605714 1723 ntBASIC11.31□□□□□ -0.6
UPK2O00526 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK2O00526 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK2O00526 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
UPK2O00526 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK2O00526 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK2O00526 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK2O00526 AC004899.1-201ENST00000424687 1714 ntBASIC11.3□□□□□ -0.6
UPK2O00526 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK2O00526 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
UPK2O00526 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
UPK2O00526 AL035633.1-201ENST00000406139 838 ntBASIC11.3□□□□□ -0.6
UPK2O00526 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.3□□□□□ -0.6
UPK2O00526 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.3□□□□□ -0.6
UPK2O00526 AC078875.1-201ENST00000431907 724 ntBASIC11.3□□□□□ -0.6
UPK2O00526 GAPDHP21-201ENST00000450301 1010 ntBASIC11.3□□□□□ -0.6
UPK2O00526 Z93015.1-201ENST00000451718 390 ntBASIC11.3□□□□□ -0.6
UPK2O00526 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC11.3□□□□□ -0.6
UPK2O00526 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC11.3□□□□□ -0.6
UPK2O00526 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK2O00526 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK2O00526 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK2O00526 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.3□□□□□ -0.6
UPK2O00526 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
UPK2O00526 AC010328.2-201ENST00000597698 1111 ntBASIC11.3□□□□□ -0.6
UPK2O00526 BNIP3P13-201ENST00000599968 566 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms