Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 AC015802.1-201ENST00000588104 1449 ntBASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTDP1Q9Y5B0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 TUBB8P4-201ENST00000511806 1324 ntBASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 AC097065.1-201ENST00000425737 517 ntBASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 VENTXP3-201ENST00000546480 773 ntBASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 RN7SL455P-201ENST00000580629 282 ntBASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 ODCP-201ENST00000459650 1639 ntBASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 TBC1D27-202ENST00000424239 1573 ntBASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTDP1Q9Y5B0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 AC021305.1-201ENST00000520656 1514 ntBASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 SHMT1P1-201ENST00000419974 1312 ntBASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 CTBP2P8-201ENST00000422584 1330 ntBASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 AP001267.2-201ENST00000532619 2086 ntBASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 LINC02228-204ENST00000642115 2962 ntBASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 RPL35P9-201ENST00000446059 350 ntBASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 AC002044.2-201ENST00000624910 970 ntBASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 LINC00431-202ENST00000636375 159 ntBASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTDP1Q9Y5B0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTDP1Q9Y5B0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTDP1Q9Y5B0 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTDP1Q9Y5B0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTDP1Q9Y5B0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms