Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFT52Q9Y366 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.27□□□□□ -0.28
IFT52Q9Y366 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFT52Q9Y366 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFT52Q9Y366 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
IFT52Q9Y366 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFT52Q9Y366 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFT52Q9Y366 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFT52Q9Y366 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
IFT52Q9Y366 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IFT52Q9Y366 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.27□□□□□ -0.28
IFT52Q9Y366 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.27□□□□□ -0.28
IFT52Q9Y366 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFT52Q9Y366 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFT52Q9Y366 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFT52Q9Y366 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
IFT52Q9Y366 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 CICP1-201ENST00000416803 2410 ntBASIC13.27□□□□□ -0.29
IFT52Q9Y366 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 KRT17P8-201ENST00000540749 863 ntBASIC13.27□□□□□ -0.29
IFT52Q9Y366 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.27□□□□□ -0.29
IFT52Q9Y366 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.27□□□□□ -0.29
IFT52Q9Y366 AC133540.1-201ENST00000620845 1019 ntBASIC13.27□□□□□ -0.29
IFT52Q9Y366 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 AHCYP4-201ENST00000419201 1315 ntBASIC13.27□□□□□ -0.29
IFT52Q9Y366 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 CCT8L1P-201ENST00000465400 1674 ntBASIC13.27□□□□□ -0.29
IFT52Q9Y366 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.27□□□□□ -0.29
IFT52Q9Y366 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFT52Q9Y366 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
IFT52Q9Y366 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
IFT52Q9Y366 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.26□□□□□ -0.29
IFT52Q9Y366 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.26□□□□□ -0.29
IFT52Q9Y366 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.26□□□□□ -0.29
IFT52Q9Y366 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 AL354877.1-201ENST00000424412 413 ntBASIC13.26□□□□□ -0.29
IFT52Q9Y366 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
IFT52Q9Y366 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.26□□□□□ -0.29
IFT52Q9Y366 COX20P2-201ENST00000452636 358 ntBASIC13.26□□□□□ -0.29
IFT52Q9Y366 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IFT52Q9Y366 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.26□□□□□ -0.29
IFT52Q9Y366 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms