Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 AP002353.1-201ENST00000528257 1599 ntBASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 FTH1P22-201ENST00000456305 520 ntBASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 AC021016.3-201ENST00000608367 477 ntBASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 AC011474.4-201ENST00000623523 2076 ntBASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms