Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 LINC00265-2P-201ENST00000413372 782 ntBASIC12.95□□□□□ -0.34
LRFN1Q9P244 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 DPY19L2P5-201ENST00000456300 331 ntBASIC12.95□□□□□ -0.34
LRFN1Q9P244 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 TMCO5B-205ENST00000530020 894 ntBASIC12.95□□□□□ -0.34
LRFN1Q9P244 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 AC007250.1-201ENST00000608934 338 ntBASIC12.95□□□□□ -0.34
LRFN1Q9P244 MIR6858-201ENST00000620733 67 ntBASIC12.95□□□□□ -0.34
LRFN1Q9P244 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LRFN1Q9P244 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRFN1Q9P244 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 GRPEL2P1-201ENST00000453145 339 ntBASIC12.94□□□□□ -0.34
LRFN1Q9P244 RN7SL767P-201ENST00000493013 295 ntBASIC12.94□□□□□ -0.34
LRFN1Q9P244 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 AC095040.1-201ENST00000513286 675 ntBASIC12.94□□□□□ -0.34
LRFN1Q9P244 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 KLF17P1-201ENST00000547105 1126 ntBASIC12.94□□□□□ -0.34
LRFN1Q9P244 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 AL161773.1-201ENST00000624845 863 ntBASIC12.94□□□□□ -0.34
LRFN1Q9P244 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRFN1Q9P244 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.94□□□□□ -0.34
LRFN1Q9P244 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRFN1Q9P244 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.93□□□□□ -0.34
LRFN1Q9P244 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRFN1Q9P244 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.93□□□□□ -0.34
LRFN1Q9P244 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRFN1Q9P244 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRFN1Q9P244 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRFN1Q9P244 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.93□□□□□ -0.34
LRFN1Q9P244 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.93□□□□□ -0.34
LRFN1Q9P244 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRFN1Q9P244 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms