Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 AC073869.1-201ENST00000415574 2762 ntBASIC11.48□□□□□ -0.57
RAB40CQ96S21 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 AC236430.1-201ENST00000402231 743 ntBASIC11.48□□□□□ -0.57
RAB40CQ96S21 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 CLUHP6-201ENST00000580789 941 ntBASIC11.48□□□□□ -0.57
RAB40CQ96S21 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 TMEM261P1-201ENST00000604899 340 ntBASIC11.48□□□□□ -0.57
RAB40CQ96S21 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 AL391825.1-201ENST00000457671 1364 ntBASIC11.48□□□□□ -0.57
RAB40CQ96S21 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 AC007952.5-201ENST00000572818 1486 ntBASIC11.48□□□□□ -0.57
RAB40CQ96S21 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 AC104758.3-203ENST00000562938 2123 ntBASIC11.48□□□□□ -0.57
RAB40CQ96S21 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB40CQ96S21 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
RAB40CQ96S21 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 AL162726.2-201ENST00000438986 1017 ntBASIC11.47□□□□□ -0.57
RAB40CQ96S21 AC002472.2-201ENST00000442739 958 ntBASIC11.47□□□□□ -0.57
RAB40CQ96S21 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 AL132655.2-201ENST00000596276 594 ntBASIC11.47□□□□□ -0.57
RAB40CQ96S21 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB40CQ96S21 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB40CQ96S21 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms