Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 ZNF767P-206ENST00000513792 565 ntBASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 AC090857.1-201ENST00000527400 390 ntBASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 PHBP15-201ENST00000574228 665 ntBASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 MIR6769A-201ENST00000617340 73 ntBASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 AC138028.6-201ENST00000616106 1482 ntBASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 LINC00638-201ENST00000555578 2518 ntBASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
PDLIM5Q96HC4 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PDLIM5Q96HC4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PDLIM5Q96HC4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.71□□□□□ -0.22
PDLIM5Q96HC4 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.71□□□□□ -0.22
PDLIM5Q96HC4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.71□□□□□ -0.22
PDLIM5Q96HC4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PDLIM5Q96HC4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AL365209.1-201ENST00000624418 6473 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AC073862.5-201ENST00000624129 2027 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 ELK2AP-201ENST00000392510 1007 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AC073869.2-201ENST00000417338 1026 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 RPSAP15-201ENST00000448168 861 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 KRT8P13-201ENST00000463294 1010 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AC114947.1-202ENST00000514136 344 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 RN7SL774P-201ENST00000577467 290 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 MIR3940-201ENST00000579148 102 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AC244452.3-201ENST00000636814 210 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 KRT8P31-201ENST00000504812 1408 ntBASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDLIM5Q96HC4 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 AC024075.2-201ENST00000598112 1473 ntBASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 AC245140.2-201ENST00000624054 1939 ntBASIC13.69□□□□□ -0.22
PDLIM5Q96HC4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms