Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC14.31□□□□□ -0.12
HLA-CQ95604 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 RBMX2P5-201ENST00000424312 969 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-CQ95604 AC005722.1-201ENST00000431878 964 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 AC010997.1-201ENST00000447646 350 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-CQ95604 RN7SL677P-201ENST00000466970 319 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 RN7SL452P-201ENST00000482923 291 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-CQ95604 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-CQ95604 ACTR6P1-201ENST00000514311 1104 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 AC104117.4-201ENST00000521486 847 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-CQ95604 AL139317.2-201ENST00000556998 158 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-CQ95604 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC14.31□□□□□ -0.12
HLA-CQ95604 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-CQ95604 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC14.31□□□□□ -0.12
HLA-CQ95604 AC090953.1-201ENST00000604305 1092 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 MIR6165-201ENST00000614803 84 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HLA-CQ95604 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-CQ95604 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HLA-CQ95604 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-CQ95604 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HLA-CQ95604 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HLA-CQ95604 AC068760.1-201ENST00000493579 1953 ntBASIC14.31□□□□□ -0.12
HLA-CQ95604 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-CQ95604 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-CQ95604 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-CQ95604 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-CQ95604 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-CQ95604 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 AP000568.1-201ENST00000282964 442 ntBASIC14.3□□□□□ -0.12
HLA-CQ95604 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 RN7SL33P-201ENST00000462543 342 ntBASIC14.3□□□□□ -0.12
HLA-CQ95604 RN7SL47P-201ENST00000488710 299 ntBASIC14.3□□□□□ -0.12
HLA-CQ95604 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 KRT18P42-201ENST00000505048 1255 ntBASIC14.3□□□□□ -0.12
HLA-CQ95604 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 AC103724.2-201ENST00000520355 476 ntBASIC14.3□□□□□ -0.12
HLA-CQ95604 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC14.3□□□□□ -0.12
HLA-CQ95604 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
HLA-CQ95604 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.3□□□□□ -0.12
HLA-CQ95604 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.3□□□□□ -0.12
HLA-CQ95604 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HLA-CQ95604 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-CQ95604 TUBA3GP-201ENST00000410028 1325 ntBASIC14.3□□□□□ -0.12
HLA-CQ95604 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-CQ95604 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HLA-CQ95604 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HLA-CQ95604 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-CQ95604 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-CQ95604 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-CQ95604 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-CQ95604 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-CQ95604 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms