Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DCTN1-204ENST00000409438 4145 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 RFX2-201ENST00000303657 3993 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 INSC-203ENST00000424273 2943 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AC138028.6-201ENST00000616106 1482 ntBASIC8.32□□□□□ -1.08
SVIPQ8NHG7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 TUT1-205ENST00000476907 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 CCDC126-201ENST00000307471 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AC008764.10-201ENST00000625135 1830 ntBASIC8.31□□□□□ -1.08
SVIPQ8NHG7 CTAGE10P-201ENST00000318353 2408 ntBASIC8.31□□□□□ -1.08
SVIPQ8NHG7 ETFDH-201ENST00000307738 1903 ntTSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 C11orf54-201ENST00000331239 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AC067931.3-201ENST00000624905 1518 ntBASIC8.31□□□□□ -1.08
SVIPQ8NHG7 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 SGK1-204ENST00000367858 3201 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AL109809.2-201ENST00000455216 493 ntBASIC8.31□□□□□ -1.08
SVIPQ8NHG7 DUX4L50-201ENST00000455245 715 ntBASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AC009088.1-201ENST00000565152 833 ntBASIC8.31□□□□□ -1.08
SVIPQ8NHG7 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AC069542.2-201ENST00000624816 216 ntBASIC8.31□□□□□ -1.08
SVIPQ8NHG7 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 FANCF-201ENST00000327470 4269 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 AC007424.1-201ENST00000552582 1641 ntTSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 BCL11A-202ENST00000356842 3959 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 C11orf57-201ENST00000280352 3693 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 RAPGEF3-204ENST00000405493 5751 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SVIPQ8NHG7 WDR37-202ENST00000358220 4582 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 KCNH5-203ENST00000394968 2490 ntTSL 2 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 CX3CR1-205ENST00000541347 3255 ntAPPRIS P1 TSL 4 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 SLC24A1-202ENST00000339868 5678 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 ETF1-201ENST00000360541 3742 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 AC009237.3-201ENST00000393279 1427 ntBASIC8.3□□□□□ -1.08
SVIPQ8NHG7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 LDHA-218ENST00000540430 2305 ntTSL 2 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 NHS-204ENST00000615422 8860 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 ZNF619-202ENST00000429348 4104 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 ST7-213ENST00000432298 1956 ntTSL 2 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 Z83836.1-201ENST00000624605 1642 ntBASIC8.3□□□□□ -1.08
SVIPQ8NHG7 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 PAK3-204ENST00000372010 2606 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 PAK3-212ENST00000519681 2638 ntTSL 5 BASIC8.3□□□□□ -1.08
SVIPQ8NHG7 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms