Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 DUX4L50-201ENST00000455245 715 ntBASIC13.19□□□□□ -0.3
NUP43Q8NFH3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 AC138649.2-201ENST00000615886 705 ntBASIC13.19□□□□□ -0.3
NUP43Q8NFH3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 AL805961.1-203ENST00000641078 1258 ntBASIC13.19□□□□□ -0.3
NUP43Q8NFH3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 FMO6P-201ENST00000236166 1620 ntBASIC13.19□□□□□ -0.3
NUP43Q8NFH3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NUP43Q8NFH3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 AC025183.3-201ENST00000623526 1482 ntBASIC13.18□□□□□ -0.3
NUP43Q8NFH3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 AC079781.5-202ENST00000641784 3743 ntBASIC13.18□□□□□ -0.3
NUP43Q8NFH3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.18□□□□□ -0.3
NUP43Q8NFH3 AC006987.1-201ENST00000413610 527 ntBASIC13.18□□□□□ -0.3
NUP43Q8NFH3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 AC006033.1-201ENST00000440505 426 ntBASIC13.18□□□□□ -0.3
NUP43Q8NFH3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms