Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 BOLA2P3-201ENST00000404566 256 ntBASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 HLA-V-201ENST00000429037 534 ntBASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 AC104989.1-201ENST00000519711 778 ntBASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 AL035252.4-201ENST00000624174 288 ntBASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 Z98259.2-201ENST00000641583 609 ntBASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 AC020917.4-201ENST00000623994 1999 ntBASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 AL445250.1-201ENST00000641671 2259 ntBASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 AL031719.1-201ENST00000623365 2587 ntBASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 AL445209.1-201ENST00000607269 3491 ntBASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN22Q8N7P3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 AC012441.2-201ENST00000444843 739 ntBASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 ACA64.2-201ENST00000459014 129 ntBASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 AC119751.2-201ENST00000504529 210 ntBASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN22Q8N7P3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 CSF2RBP1-201ENST00000447905 391 ntBASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 GOLGA2P8-201ENST00000505201 779 ntBASIC12.86□□□□□ -0.35
CLDN22Q8N7P3 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms