Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 DLX4-206ENST00000611342 1662 ntBASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 AC067942.1-202ENST00000471756 1057 ntBASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 RN7SL672P-201ENST00000474091 317 ntBASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 AC104759.1-201ENST00000559109 939 ntBASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 AGAP10P-201ENST00000454844 2418 ntBASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42BPAQ5VT25 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 AP000343.1-201ENST00000440602 385 ntBASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 AF186996.6-201ENST00000485294 149 ntBASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 HNRNPA1P55-201ENST00000505935 955 ntBASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 METTL23-211ENST00000589977 617 ntTSL 3 BASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDC42BPAQ5VT25 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 SNORD88B-201ENST00000408454 91 ntBASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 ASLP1-201ENST00000428790 637 ntBASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 RN7SL33P-201ENST00000462543 342 ntBASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 EEF1DP7-201ENST00000580496 513 ntBASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC20.39■□□□□ 0.85
CDC42BPAQ5VT25 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 TUBB8P5-201ENST00000445286 1351 ntBASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 AC007191.1-201ENST00000623179 2995 ntBASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 FAM45BP-202ENST00000592932 1624 ntBASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 GAPDHP29-201ENST00000429913 985 ntBASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 HNRNPA1P3-201ENST00000440968 551 ntBASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 RPL3P9-201ENST00000463217 1183 ntBASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 ALDOAP1-201ENST00000491506 1078 ntBASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 IGHVII-33-1-201ENST00000524010 280 ntBASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms