Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 LINC00638-201ENST00000555578 2518 ntBASIC18.17■□□□□ 0.5
CCDC27Q2M243 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 AL365181.3-201ENST00000605886 3222 ntBASIC18.17■□□□□ 0.5
CCDC27Q2M243 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC27Q2M243 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC27Q2M243 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC27Q2M243 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC27Q2M243 MIR1307-201ENST00000408840 149 ntBASIC18.16■□□□□ 0.5
CCDC27Q2M243 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC27Q2M243 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 KRT8P2-201ENST00000556193 944 ntBASIC18.16■□□□□ 0.5
CCDC27Q2M243 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 AC007250.1-201ENST00000608934 338 ntBASIC18.16■□□□□ 0.5
CCDC27Q2M243 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC27Q2M243 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC27Q2M243 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC27Q2M243 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC27Q2M243 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 MSNP1-201ENST00000511640 1732 ntBASIC18.15■□□□□ 0.5
CCDC27Q2M243 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 AL512430.1-201ENST00000392575 860 ntBASIC18.15■□□□□ 0.5
CCDC27Q2M243 OR2W2P-201ENST00000406313 909 ntBASIC18.15■□□□□ 0.5
CCDC27Q2M243 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 EEF1DP6-201ENST00000449232 372 ntBASIC18.15■□□□□ 0.5
CCDC27Q2M243 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 PRSS3P1-201ENST00000503996 742 ntBASIC18.15■□□□□ 0.5
CCDC27Q2M243 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 OR5BD1P-201ENST00000532527 817 ntBASIC18.15■□□□□ 0.5
CCDC27Q2M243 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 PRKXP1-201ENST00000561423 1122 ntBASIC18.15■□□□□ 0.5
CCDC27Q2M243 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC27Q2M243 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC27Q2M243 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.15■□□□□ 0.5
CCDC27Q2M243 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms