Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC18.94■□□□□ 0.62
CGNL1Q0VF96 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 AC005840.4-201ENST00000541242 2494 ntBASIC18.93■□□□□ 0.62
CGNL1Q0VF96 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 SSR4-202ENST00000370085 526 ntTSL 2 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 OR7E115P-201ENST00000382617 1024 ntBASIC18.93■□□□□ 0.62
CGNL1Q0VF96 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.93■□□□□ 0.62
CGNL1Q0VF96 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 LINC00431-202ENST00000636375 159 ntBASIC18.93■□□□□ 0.62
CGNL1Q0VF96 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 AGAP10P-201ENST00000454844 2418 ntBASIC18.93■□□□□ 0.62
CGNL1Q0VF96 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGNL1Q0VF96 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 AC093826.1-201ENST00000508655 993 ntBASIC18.92■□□□□ 0.62
CGNL1Q0VF96 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 AL022344.2-201ENST00000568976 968 ntBASIC18.92■□□□□ 0.62
CGNL1Q0VF96 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 NAMA-206ENST00000605377 509 ntTSL 5 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 AL118522.1-201ENST00000611368 560 ntBASIC18.92■□□□□ 0.62
CGNL1Q0VF96 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CGNL1Q0VF96 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 AC011474.4-201ENST00000623523 2076 ntBASIC18.91■□□□□ 0.62
CGNL1Q0VF96 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 C1R-201ENST00000535233 2211 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms