Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AC022210.1-201ENST00000449856 793 ntBASIC9.38□□□□□ -0.91
SYCNQ0VAF6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AC003686.1-201ENST00000550956 1034 ntBASIC9.38□□□□□ -0.91
SYCNQ0VAF6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AL136295.7-201ENST00000619226 1200 ntBASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AC061965.1-201ENST00000560524 1465 ntBASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AC007952.5-201ENST00000572818 1486 ntBASIC9.38□□□□□ -0.91
SYCNQ0VAF6 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 GOLGA8IP-202ENST00000611635 2100 ntBASIC9.38□□□□□ -0.91
SYCNQ0VAF6 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 USP39-207ENST00000450066 2086 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCNQ0VAF6 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 GOLGA8EP-201ENST00000530246 1959 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 FAM90A12P-201ENST00000519497 2375 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 FAM90A24P-201ENST00000520792 2369 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 MIR658-201ENST00000385210 100 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 AC103592.1-201ENST00000394513 664 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 HSPB1P2-201ENST00000448722 546 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 RNA5SP412-201ENST00000516234 123 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 IGHV3-71-201ENST00000523324 359 ntBASIC9.37□□□□□ -0.91
SYCNQ0VAF6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCNQ0VAF6 RN7SL560P-201ENST00000577943 264 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms