Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.21■□□□□ 0.03
SNRPFP62306 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNRPFP62306 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.21■□□□□ 0.03
SNRPFP62306 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNRPFP62306 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SNRPFP62306 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNRPFP62306 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNRPFP62306 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNRPFP62306 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.21■□□□□ 0.02
SNRPFP62306 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNRPFP62306 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.21■□□□□ 0.02
SNRPFP62306 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SNRPFP62306 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
SNRPFP62306 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.21■□□□□ 0.02
SNRPFP62306 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SNRPFP62306 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SNRPFP62306 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.2■□□□□ 0.02
SNRPFP62306 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SNRPFP62306 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.2■□□□□ 0.02
SNRPFP62306 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SNRPFP62306 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.2■□□□□ 0.02
SNRPFP62306 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 EEF1DP2-201ENST00000433698 843 ntBASIC15.2■□□□□ 0.02
SNRPFP62306 IGHJ2P-201ENST00000454480 60 ntBASIC15.2■□□□□ 0.02
SNRPFP62306 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 RN7SL769P-201ENST00000469386 295 ntBASIC15.2■□□□□ 0.02
SNRPFP62306 AC130709.1-201ENST00000484779 1212 ntBASIC15.2■□□□□ 0.02
SNRPFP62306 RN7SL81P-201ENST00000493781 261 ntBASIC15.2■□□□□ 0.02
SNRPFP62306 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 AC095040.1-201ENST00000513286 675 ntBASIC15.2■□□□□ 0.02
SNRPFP62306 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.2■□□□□ 0.02
SNRPFP62306 AC138701.2-201ENST00000553634 226 ntBASIC15.2■□□□□ 0.02
SNRPFP62306 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC15.2■□□□□ 0.02
SNRPFP62306 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.2■□□□□ 0.02
SNRPFP62306 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.2■□□□□ 0.02
SNRPFP62306 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.2■□□□□ 0.02
SNRPFP62306 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.2■□□□□ 0.02
SNRPFP62306 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SNRPFP62306 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 MSNP1-201ENST00000511640 1732 ntBASIC15.2■□□□□ 0.02
SNRPFP62306 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNRPFP62306 AC020763.3-201ENST00000625095 2904 ntBASIC15.2■□□□□ 0.02
SNRPFP62306 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.2■□□□□ 0.02
SNRPFP62306 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.19■□□□□ 0.02
SNRPFP62306 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
SNRPFP62306 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.19■□□□□ 0.02
SNRPFP62306 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.19■□□□□ 0.02
SNRPFP62306 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.19■□□□□ 0.02
SNRPFP62306 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.19■□□□□ 0.02
SNRPFP62306 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.19■□□□□ 0.02
SNRPFP62306 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SNRPFP62306 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SNRPFP62306 GGTLC4P-201ENST00000402176 664 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms