Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
GFRA1P56159 RN7SL736P-201ENST00000613111 269 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 MIR6858-201ENST00000620733 67 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.56□□□□□ -0.4
GFRA1P56159 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
GFRA1P56159 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
GFRA1P56159 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.56□□□□□ -0.4
GFRA1P56159 PES1P2-201ENST00000449745 1735 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.56□□□□□ -0.4
GFRA1P56159 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
GFRA1P56159 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.56□□□□□ -0.4
GFRA1P56159 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
GFRA1P56159 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.56□□□□□ -0.4
GFRA1P56159 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GFRA1P56159 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GFRA1P56159 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
GFRA1P56159 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.55□□□□□ -0.4
GFRA1P56159 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GFRA1P56159 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 OR2W2P-201ENST00000406313 909 ntBASIC12.55□□□□□ -0.4
GFRA1P56159 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.55□□□□□ -0.4
GFRA1P56159 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
GFRA1P56159 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.55□□□□□ -0.4
GFRA1P56159 LYPLA2P1-203ENST00000447689 696 ntBASIC12.55□□□□□ -0.4
GFRA1P56159 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.55□□□□□ -0.4
GFRA1P56159 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.55□□□□□ -0.4
GFRA1P56159 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.55□□□□□ -0.4
GFRA1P56159 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.55□□□□□ -0.4
GFRA1P56159 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.55□□□□□ -0.4
GFRA1P56159 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
GFRA1P56159 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC12.55□□□□□ -0.4
GFRA1P56159 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.55□□□□□ -0.4
GFRA1P56159 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.55□□□□□ -0.4
GFRA1P56159 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 AL009176.1-201ENST00000607876 650 ntBASIC12.55□□□□□ -0.4
GFRA1P56159 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.55□□□□□ -0.4
GFRA1P56159 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.55□□□□□ -0.4
GFRA1P56159 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.55□□□□□ -0.4
GFRA1P56159 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.55□□□□□ -0.4
GFRA1P56159 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.55□□□□□ -0.4
GFRA1P56159 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.55□□□□□ -0.4
GFRA1P56159 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 AC092978.1-202ENST00000637590 1327 ntBASIC12.55□□□□□ -0.4
GFRA1P56159 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.55□□□□□ -0.4
GFRA1P56159 AC011474.4-201ENST00000623523 2076 ntBASIC12.55□□□□□ -0.4
GFRA1P56159 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 AC090502.4-201ENST00000551714 1386 ntBASIC12.55□□□□□ -0.4
GFRA1P56159 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFRA1P56159 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
GFRA1P56159 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
GFRA1P56159 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
GFRA1P56159 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.54□□□□□ -0.4
GFRA1P56159 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.54□□□□□ -0.4
GFRA1P56159 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
GFRA1P56159 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
GFRA1P56159 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
GFRA1P56159 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
GFRA1P56159 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.54□□□□□ -0.4
GFRA1P56159 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms