Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 AL359510.2-201ENST00000624958 2249 ntBASIC10.86□□□□□ -0.67
RAB4AP20338 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 AC005921.3-201ENST00000623774 2151 ntBASIC10.86□□□□□ -0.67
RAB4AP20338 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 AL445647.1-201ENST00000606221 3599 ntBASIC10.86□□□□□ -0.67
RAB4AP20338 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 CAPN10-AS1-201ENST00000567819 4000 ntBASIC10.86□□□□□ -0.67
RAB4AP20338 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
RAB4AP20338 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 AL645937.6-201ENST00000641122 3727 ntBASIC10.85□□□□□ -0.67
RAB4AP20338 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
RAB4AP20338 TP53AIP1-206ENST00000602346 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RAB4AP20338 LINC00567-201ENST00000569854 3409 ntBASIC10.85□□□□□ -0.67
RAB4AP20338 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RAB4AP20338 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 AC004870.1-201ENST00000315132 882 ntBASIC10.85□□□□□ -0.67
RAB4AP20338 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
RAB4AP20338 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.85□□□□□ -0.67
RAB4AP20338 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.85□□□□□ -0.67
RAB4AP20338 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 MTND6P24-201ENST00000440466 518 ntBASIC10.85□□□□□ -0.67
RAB4AP20338 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.85□□□□□ -0.67
RAB4AP20338 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.85□□□□□ -0.67
RAB4AP20338 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC10.85□□□□□ -0.67
RAB4AP20338 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 AC025048.3-201ENST00000590609 569 ntBASIC10.85□□□□□ -0.67
RAB4AP20338 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.85□□□□□ -0.67
RAB4AP20338 AC005702.4-201ENST00000618393 416 ntBASIC10.85□□□□□ -0.67
RAB4AP20338 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 AL035456.1-201ENST00000456064 1369 ntBASIC10.85□□□□□ -0.67
RAB4AP20338 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 AC073862.5-201ENST00000624129 2027 ntBASIC10.85□□□□□ -0.67
RAB4AP20338 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RAB4AP20338 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 MED24-201ENST00000356271 3446 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB4AP20338 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.85□□□□□ -0.67
RAB4AP20338 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 PDLIM5-210ENST00000508216 1794 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 CARS-214ENST00000529772 2637 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC10.85□□□□□ -0.67
RAB4AP20338 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 PI4KAP2-201ENST00000360806 2080 ntBASIC10.85□□□□□ -0.67
RAB4AP20338 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RAB4AP20338 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB4AP20338 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB4AP20338 KRT8P14-201ENST00000414254 1442 ntBASIC10.84□□□□□ -0.67
RAB4AP20338 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms