Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.41□□□□□ -0.42
ATF1P18846 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.4□□□□□ -0.42
ATF1P18846 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.4□□□□□ -0.42
ATF1P18846 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
ATF1P18846 AC027369.3-201ENST00000530465 3707 ntBASIC12.4□□□□□ -0.42
ATF1P18846 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 AC061965.1-201ENST00000560524 1465 ntBASIC12.4□□□□□ -0.42
ATF1P18846 AC025183.3-201ENST00000623526 1482 ntBASIC12.4□□□□□ -0.42
ATF1P18846 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.4□□□□□ -0.42
ATF1P18846 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.4□□□□□ -0.42
ATF1P18846 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 AHCYP2-201ENST00000430630 1300 ntBASIC12.4□□□□□ -0.42
ATF1P18846 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ATF1P18846 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ATF1P18846 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.4□□□□□ -0.42
ATF1P18846 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 AC002350.2-201ENST00000623894 1828 ntBASIC12.4□□□□□ -0.42
ATF1P18846 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.4□□□□□ -0.42
ATF1P18846 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.4□□□□□ -0.42
ATF1P18846 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 TMEM14DP-201ENST00000422205 345 ntBASIC12.4□□□□□ -0.42
ATF1P18846 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.4□□□□□ -0.42
ATF1P18846 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.4□□□□□ -0.42
ATF1P18846 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ATF1P18846 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.4□□□□□ -0.42
ATF1P18846 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.4□□□□□ -0.42
ATF1P18846 AC132938.2-201ENST00000579188 680 ntBASIC12.4□□□□□ -0.42
ATF1P18846 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.4□□□□□ -0.42
ATF1P18846 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ATF1P18846 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.4□□□□□ -0.42
ATF1P18846 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ATF1P18846 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.4□□□□□ -0.42
ATF1P18846 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ATF1P18846 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.4□□□□□ -0.42
ATF1P18846 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ATF1P18846 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATF1P18846 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ATF1P18846 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
ATF1P18846 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.4□□□□□ -0.43
ATF1P18846 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
ATF1P18846 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ATF1P18846 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.4□□□□□ -0.43
ATF1P18846 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
ATF1P18846 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
ATF1P18846 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ATF1P18846 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ATF1P18846 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
ATF1P18846 AL008718.2-201ENST00000609206 1313 ntBASIC12.39□□□□□ -0.43
ATF1P18846 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.39□□□□□ -0.43
ATF1P18846 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ATF1P18846 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.39□□□□□ -0.43
ATF1P18846 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.39□□□□□ -0.43
ATF1P18846 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.39□□□□□ -0.43
ATF1P18846 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
ATF1P18846 LINC00638-201ENST00000555578 2518 ntBASIC12.39□□□□□ -0.43
ATF1P18846 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
ATF1P18846 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.39□□□□□ -0.43
ATF1P18846 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 REXO1L6P-201ENST00000603433 1515 ntBASIC12.39□□□□□ -0.43
ATF1P18846 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.39□□□□□ -0.43
ATF1P18846 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ATF1P18846 KRT43P-201ENST00000434019 910 ntBASIC12.39□□□□□ -0.43
ATF1P18846 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.39□□□□□ -0.43
ATF1P18846 AL645933.1-201ENST00000440087 609 ntBASIC12.39□□□□□ -0.43
ATF1P18846 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.39□□□□□ -0.43
ATF1P18846 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ATF1P18846 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.39□□□□□ -0.43
ATF1P18846 RBM8B-201ENST00000555532 525 ntBASIC12.39□□□□□ -0.43
ATF1P18846 DUX4L46-201ENST00000566845 751 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms