Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 CTBP2P5-201ENST00000454986 1264 ntBASIC12.57□□□□□ -0.4
APOC1P02654 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 AC100850.1-201ENST00000506768 649 ntBASIC12.57□□□□□ -0.4
APOC1P02654 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.57□□□□□ -0.4
APOC1P02654 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.57□□□□□ -0.4
APOC1P02654 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.57□□□□□ -0.4
APOC1P02654 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.57□□□□□ -0.4
APOC1P02654 AC009955.4-201ENST00000597192 544 ntBASIC12.57□□□□□ -0.4
APOC1P02654 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 AC023794.5-201ENST00000564380 2157 ntBASIC12.57□□□□□ -0.4
APOC1P02654 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 AC244394.1-201ENST00000435000 1665 ntBASIC12.57□□□□□ -0.4
APOC1P02654 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
APOC1P02654 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.56□□□□□ -0.4
APOC1P02654 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.56□□□□□ -0.4
APOC1P02654 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.56□□□□□ -0.4
APOC1P02654 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
APOC1P02654 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
APOC1P02654 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
APOC1P02654 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.56□□□□□ -0.4
APOC1P02654 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.56□□□□□ -0.4
APOC1P02654 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 HMGA1P1-201ENST00000415560 1062 ntBASIC12.56□□□□□ -0.4
APOC1P02654 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.56□□□□□ -0.4
APOC1P02654 YBX1P6-201ENST00000442962 1002 ntBASIC12.56□□□□□ -0.4
APOC1P02654 AC104989.1-201ENST00000519711 778 ntBASIC12.56□□□□□ -0.4
APOC1P02654 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 RAB43P1-201ENST00000561790 589 ntBASIC12.56□□□□□ -0.4
APOC1P02654 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 AC133540.1-201ENST00000620845 1019 ntBASIC12.56□□□□□ -0.4
APOC1P02654 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.56□□□□□ -0.4
APOC1P02654 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
APOC1P02654 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC1P02654 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.56□□□□□ -0.4
APOC1P02654 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
APOC1P02654 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
APOC1P02654 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.55□□□□□ -0.4
APOC1P02654 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
APOC1P02654 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC1P02654 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms