Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 AC092053.3-201ENST00000641308 4975 ntBASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 AC073869.2-201ENST00000417338 1026 ntBASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 AK2P2-201ENST00000439142 405 ntBASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 AC009560.1-201ENST00000620208 434 ntBASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 AC015909.5-201ENST00000624336 2266 ntBASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 AL928654.5-201ENST00000624831 2501 ntBASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.76■□□□□ 0.11
COL4A3BPQ9Y5P4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 AC006480.2-201ENST00000609770 1337 ntBASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 AC105206.1-202ENST00000314927 2368 ntBASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 FTH1P22-201ENST00000456305 520 ntBASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 NDUFS6P1-201ENST00000485187 316 ntBASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 KRT18P8-201ENST00000581937 1246 ntBASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL4A3BPQ9Y5P4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 RCC2P1-201ENST00000452257 1476 ntBASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 AC061965.1-201ENST00000560524 1465 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms